The gene lists of sc.filter() and the clusters of sc.cluster.trend().
Value
An object of class Significant: the gene lists of
sc.filter() and the clusters of sc.cluster.trend(), stored in the
Significant slot of a ScMaSigPro object. scmpResults()
returns them per gene.
Details
validObject() checks that every element of genes is a character
vector of gene names and that clusters holds one value per gene, named
by gene.
Slots
genesA named list of gene lists.
clustersA list with the cluster of each clustered gene, named by gene.
See also
Other classes:
Estimates,
MatrixDesign,
ParameterConfig,
ScMaSigPro,
VariableProfiles,
updateObject,ScMaSigPro-method
Examples
data("scmp.ob", package = "scMaSigPro")
table(scmpResults(scmp.ob)$cluster)
#>
#> 1 2 3 4
#> 11 15 8 1